| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 40-205 | 166 | 206-435 | 1-23 | 24-39 | 23 | 229 | slipknot | ||
| view details |
 |
41 | 17-243 | 227 | 1-16 | 289-435 | 244-288 | 16 | 147 | slipknot |
Chain Sequence |
MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 12-236 | 225 | 1-11 | 247-435 | 237-246 | 11 | 189 | slipknot | ||
| view details |
 |
4.1 | 8-246 | 239 | 1-7 | 253-435 | 247-252 | 7 | 183 | slipknot | ||
| view details |
|
4.1 | 11-264 | 254 | 1-10 | 275-435 | 265-274 | 10 | 161 | slipknot | ||
| view details |
|
4.1 | 18-265 | 248 | 1-17 | 284-435 | 266-283 | 17 | 152 | slipknot | ||
| view details |
|
3.2 | 18-283 | 266 | 1-17 | 285-435 | 284-284 | 17 | 151 | slipknot | ||
| view details |
 |
1.1 | 24-221 | 198 | 1-17, 242-435 | 18-23, 222-241 | 17 | 194 | slipknot | |||
| view details |
 |
2.1 | 46-290 | 245 | 1-17, 340-435 | 18-45, 291-339 | 17 | 96 | slipknot | |||
| view details |
|
2.1 | 32-206 | 175 | 1-19, 223-435 | 20-31, 207-222 | 19 | 213 | slipknot | |||
| view details |
|
2.1 | 46-361 | 316 | 362-435 | 1-19 | 20-45 | 19 | 73 | slipknot | ||
| view details |
|
2.1 | 35-203 | 169 | 1-20, 217-435 | 21-34, 204-216 | 20 | 219 | slipknot | |||
| view details |
|
1.1 | 35-216 | 182 | 1-31, 223-435 | 32-34, 217-222 | 31 | 213 | slipknot | |||
| view details |
|
2.1 | 36-206 | 171 | 1-34, 223-435 | 35-35, 207-222 | 34 | 213 | slipknot | |||
| view details |
|
2.1 | 31-222 | 192 | 1-23, 226-435 | 24-30, 223-225 | 23 | 210 | slipknot | |||
| view details |
|
1.1 | 47-227 | 181 | 1-32, 244-435 | 33-46, 228-243 | 32 | 192 | slipknot | |||
| view details |
|
2.1 | 42-197 | 156 | 1-35, 209-435 | 36-41, 198-208 | 35 | 227 | slipknot | |||
| view details |
|
2.1 | 46-208 | 163 | 1-35, 221-435 | 36-45, 209-220 | 35 | 215 | slipknot |
| sequence length |
435
|
| structure length |
435
|
| publication title |
Structure and mechanism of a na+-independent amino Acid transporter.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Uncharacterized protein MJ0609
|
| source organism |
Methanocaldococcus jannaschii
|
| total genus |
 Genus: 161
|
| ec nomenclature | |
| pdb deposition date | 2009-03-05 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF13520 | AA_permease_2 | Amino acid permease |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
