| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 39-206 | 168 | 207-433 | 1-20 | 21-38 | 20 | 226 | slipknot | ||
| view details |
 |
41 | 15-240 | 226 | 1-14 | 283-433 | 241-282 | 14 | 151 | slipknot |
Chain Sequence |
LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 12-233 | 222 | 1-11 | 245-433 | 234-244 | 11 | 189 | slipknot | ||
| view details |
 |
4.1 | 8-244 | 237 | 1-7 | 256-433 | 245-255 | 7 | 178 | slipknot | ||
| view details |
|
4.1 | 22-257 | 236 | 1-21 | 279-433 | 258-278 | 21 | 155 | slipknot | ||
| view details |
|
3.2 | 13-280 | 268 | 1-12 | 288-433 | 281-287 | 12 | 146 | slipknot | ||
| view details |
|
3.2 | 11-254 | 244 | 1-3, 258-433 | 4-10, 255-257 | 3 | 176 | slipknot | |||
| view details |
 |
2.3 | 22-237 | 216 | 1-11, 247-433 | 12-21, 238-246 | 11 | 187 | slipknot | |||
| view details |
 |
2.1 | 29-206 | 178 | 1-15, 223-433 | 16-28, 207-222 | 15 | 211 | slipknot | |||
| view details |
|
2.1 | 44-287 | 244 | 1-15, 342-433 | 16-43, 288-341 | 15 | 92 | slipknot | |||
| view details |
|
2.1 | 44-353 | 310 | 354-433 | 1-15 | 16-43 | 15 | 79 | slipknot | ||
| view details |
 |
1.1 | 26-225 | 200 | 1-16, 237-433 | 17-25, 226-236 | 16 | 197 | slipknot | |||
| view details |
|
1.1 | 26-236 | 211 | 1-17, 242-433 | 18-25, 237-241 | 17 | 192 | slipknot | |||
| view details |
|
2.1 | 36-208 | 173 | 1-29, 221-433 | 30-35, 209-220 | 29 | 213 | slipknot | |||
| view details |
|
1.1 | 45-220 | 176 | 1-31, 244-433 | 32-44, 221-243 | 31 | 190 | slipknot | |||
| view details |
|
2.1 | 44-206 | 163 | 1-36, 219-433 | 37-43, 207-218 | 36 | 215 | slipknot |
| sequence length |
433
|
| structure length |
433
|
| publication title |
Structure and mechanism of a na+-independent amino Acid transporter.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Uncharacterized protein MJ0609
|
| source organism |
Methanocaldococcus jannaschii
|
| total genus |
 Genus: 193
|
| ec nomenclature | |
| pdb deposition date | 2009-03-05 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF13520 | AA_permease_2 | Amino acid permease |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
