| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
-31 | 192-255 | 64 | 1-191, 256-390 | 191 | 135 | knot |
Chain Sequence |
VARYPPIVASMTADSKAARLRRIERWQATVHAAESVDEKLRILTKMQFMKYMVYPQTFALNADRWYQYFTKTVFLSGLP--------------------AALRAVACDCLLQEHFYLRRRRRVHRYEESEVISLPFLDQLVSTLVGLLSPHNPALAAAALDYRCPVHFYWVRGEEIIPRGHRRGRIDDLRYQIDDKPNNQIRISKQLAEFVPLDYSVPIEIPTIKCKPDKLPLFKRQYENHIFVGSKTADPCCYGHTQFHLLPDKLRRERLLRQNCADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKPLYETIEDNDVKGFNDDVLLQIVHFLLNRPK
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
2.1m | 52-358 | 307 | 1-51, 359-370 | 51 | 12 | knot | |||
| view details |
 |
3.1m | 170-238 | 69 | 1-151, 259-370 | 152-169, 239-258 | 151 | 112 | slipknot | |||
| view details |
|
3.1m | 171-240 | 70 | 1-151, 265-370 | 152-170, 241-264 | 151 | 106 | slipknot | |||
| view details |
|
2.1m | 170-264 | 95 | 1-151, 278-370 | 152-169, 265-277 | 151 | 93 | slipknot | |||
| view details |
|
2.1m | 162-277 | 116 | 1-156, 279-370 | 157-161, 278-278 | 156 | 92 | slipknot | |||
| view details |
|
3.1m | 171-333 | 163 | 334-370 | 1-151 | 152-170 | 151 | 36 | slipknot | ||
| view details |
|
2.1m | 171-264 | 94 | 1-169, 275-370 | 170-170, 265-274 | 169 | 96 | slipknot | |||
| view details |
|
3.1m | 170-299 | 130 | 1-156, 312-370 | 157-169, 300-311 | 156 | 59 | slipknot |
| sequence length |
390
|
| structure length |
370
|
| publication title |
Structure of the large ribosomal subunit from human mitochondria.
pubmed doi rcsb |
| molecule tags |
Ribosome
|
| molecule keywords |
16S rRNA
|
| missing residues |
80-99
|
| total genus |
 Genus: 26
|
| ec nomenclature | |
| pdb deposition date | 2014-08-26 |
| KnotProt deposition date | 2014-10-15 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
