3JYWE

Structure of the 60s proteins for eukaryotic ribosome based on cryo-em map of thermomyces lanuginosus ribosome at 8.9a resolution
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 84-214 131 1-83, 215-237 83 23 knot
Chain Sequence
AYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAI
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1 43-215 173 1-42, 216-237 42 22 knot
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2.1 43-214 172 1-33, 216-237 34-42, 215-215 33 22 slipknot
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2.1 44-215 172 1-42, 219-237 43-43, 216-218 42 19 slipknot
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3.1 44-218 175 1-42, 222-237 43-43, 219-221 42 16 slipknot
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3.1 45-215 171 1-43, 222-237 44-44, 216-221 43 16 slipknot
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3.1 45-221 177 1-42, 223-237 43-44, 222-222 42 15 slipknot
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2.1 45-222 178 1-42, 224-237 43-44, 223-223 42 14 slipknot
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2.1 83-214 132 1-45, 221-237 46-82, 215-220 45 17 slipknot
publication title Comprehensive molecular structure of the eukaryotic ribosome.
pubmed doi rcsb
structure length 237
molecule tags Ribosome
sequence length 237
molecule keywords 60S ribosomal protein L32
ec nomenclature
pdb deposition date 2009-09-22
KnotProt deposition date 2014-07-31
Image from the rcsb pdb (www.rcsb.org)
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