| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 36-207 | 172 | 208-430 | 1-20 | 21-35 | 20 | 222 | slipknot | ||
| view details |
 |
41 | 13-241 | 229 | 1-12 | 283-430 | 242-282 | 12 | 148 | slipknot |
Chain Sequence |
DAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN--------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 7-243 | 237 | 1-6 | 253-410 | 244-252 | 6 | 158 | slipknot | ||
| view details |
 |
3.2 | 21-244 | 224 | 1-20 | 263-410 | 245-262 | 20 | 148 | slipknot | ||
| view details |
|
 |
2.1 | 39-273 | 235 | 1-14, 323-410 | 15-38, 274-322 | 14 | 88 | slipknot | ||
| view details |
|
|
2.1 | 41-336 | 296 | 337-410 | 1-14 | 15-40 | 14 | 73 | slipknot | |
| view details |
 |
1.1 | 29-221 | 193 | 1-15, 242-410 | 16-28, 222-241 | 15 | 169 | slipknot | |||
| view details |
|
2.1 | 39-205 | 167 | 1-17, 228-410 | 18-38, 206-227 | 17 | 183 | slipknot | |||
| view details |
|
2.1 | 30-200 | 171 | 1-21, 206-410 | 22-29, 201-205 | 21 | 205 | slipknot | |||
| view details |
|
2.1 | 31-227 | 197 | 1-28, 230-410 | 29-30, 228-229 | 28 | 181 | slipknot | |||
| view details |
|
2.1 | 36-227 | 192 | 1-30, 230-410 | 31-35, 228-229 | 30 | 181 | slipknot | |||
| view details |
|
1.1 | 41-227 | 187 | 1-31, 243-410 | 32-40, 228-242 | 31 | 168 | slipknot |
| sequence length |
430
|
| structure length |
410
|
| publication title |
Structure and mechanism of an amino acid antiporter
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Arginine/agmatine antiporter
|
| source organism |
Escherichia coli
|
| missing residues |
248-267
|
| total genus |
 Genus: 121
|
| ec nomenclature | |
| pdb deposition date | 2010-02-10 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF13520 | AA_permease_2 | Amino acid permease |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
