| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 36-205 | 170 | 206-430 | 1-19 | 20-35 | 19 | 224 | slipknot | ||
| view details |
 |
41 | 14-242 | 229 | 1-13 | 284-430 | 243-283 | 13 | 147 | slipknot |
Chain Sequence |
DAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN--------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNP
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 18-241 | 224 | 1-17 | 260-410 | 242-259 | 17 | 151 | slipknot | ||
| view details |
 |
1.1 | 24-221 | 198 | 1-12, 241-410 | 13-23, 222-240 | 12 | 170 | slipknot | |||
| view details |
|
 |
2.1 | 39-275 | 237 | 1-13, 333-410 | 14-38, 276-332 | 13 | 78 | slipknot | ||
| view details |
|
2.1 | 32-198 | 167 | 1-15, 215-410 | 16-31, 199-214 | 15 | 196 | slipknot | |||
| view details |
|
2.1 | 32-214 | 183 | 1-15, 224-410 | 16-31, 215-223 | 15 | 187 | slipknot | |||
| view details |
|
|
2.1 | 40-341 | 302 | 342-410 | 1-15 | 16-39 | 15 | 68 | slipknot | |
| view details |
|
2.1 | 35-203 | 169 | 1-31, 224-410 | 32-34, 204-223 | 31 | 187 | slipknot | |||
| view details |
|
2.1 | 27-223 | 197 | 1-23, 227-410 | 24-26, 224-226 | 23 | 184 | slipknot | |||
| view details |
|
2.1 | 34-223 | 190 | 1-26, 227-410 | 27-33, 224-226 | 26 | 184 | slipknot | |||
| view details |
|
2.1 | 32-234 | 203 | 1-23, 242-410 | 24-31, 235-241 | 23 | 169 | slipknot | |||
| view details |
|
2.1 | 32-226 | 195 | 1-24, 234-410 | 25-31, 227-233 | 24 | 177 | slipknot | |||
| view details |
|
2.1 | 34-196 | 163 | 1-25, 204-410 | 26-33, 197-203 | 25 | 207 | slipknot | |||
| view details |
|
2.1 | 39-225 | 187 | 1-29, 243-410 | 30-38, 226-242 | 29 | 168 | slipknot | |||
| view details |
|
1.1 | 39-221 | 183 | 1-33, 226-410 | 34-38, 222-225 | 33 | 185 | slipknot |
| sequence length |
430
|
| structure length |
410
|
| publication title |
Structure and mechanism of an amino acid antiporter
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Arginine/agmatine antiporter
|
| source organism |
Escherichia coli
|
| missing residues |
248-267
|
| total genus |
 Genus: 110
|
| ec nomenclature | |
| pdb deposition date | 2010-02-11 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF13520 | AA_permease_2 | Amino acid permease |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
