| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-266 | 215 | 1-51 | 286-409 | 267-285 | 51 | 124 | slipknot |
Chain Sequence |
SAEQFYGKMDNQKMLDLVRASSTKIDFDPTLLPTMNSNPATYQGKRKNLVILLQESLGAQFVGSLGGLPLTPNLDELMQEGWQFTQMYATGTRSVRGIEAVTTGFPPSPSRAVVKLSKSQTGFFTIADLLKEQGYHTQFIYGGEANFDNMKTFFFGNGFDQIVEEKNYTNPGFVGSWGVSDEDLYNKADEEFERLSKGDKPFFSLVFTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDARVFGANLVPVKHFHIPALIIGKDIQPRKDDRIANNIDMPPTLLSLIGVDAKTPMIGRDLTKPLAREDERAMMQYDKNFGYLTRDNLVVLSPGEKVSTMEYDFESQTMKPLEVDESVIDRAKANALFASKAYQNNWYSSKR
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 49-265 | 217 | 1-48 | 284-409 | 266-283 | 48 | 126 | slipknot | ||
| view details |
 |
2.1 | 27-283 | 257 | 1-26 | 287-409 | 284-286 | 26 | 123 | slipknot | ||
| view details |
|
2.1 | 35-264 | 230 | 1-3, 266-409 | 4-34, 265-265 | 3 | 144 | slipknot | |||
| view details |
|
3.1 | 48-283 | 236 | 1-26, 287-409 | 27-47, 284-286 | 26 | 123 | slipknot | |||
| view details |
|
2.1 | 48-263 | 216 | 1-35, 266-409 | 36-47, 264-265 | 35 | 144 | slipknot | |||
| view details |
|
2.1 | 49-283 | 235 | 1-47, 286-409 | 48-48, 284-285 | 47 | 124 | slipknot |
| sequence length |
409
|
| structure length |
409
|
| publication title |
The Crystal Structure of a Protein in the Alkaline Phosphatase Superfamily from Vibrio parahaemolyticus to 1.95A
rcsb |
| molecule tags |
Structural genomics, unknown function
|
| molecule keywords |
Uncharacterized protein VP1736
|
| source organism |
Vibrio parahaemolyticus
|
| total genus |
 Genus: 134
|
| ec nomenclature | |
| pdb deposition date | 2010-02-25 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00884 | Sulfatase | Sulfatase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
