3NDS | KnotProt

Cysteine knot

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The Resolver thinks Pdb

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Time for openFile(/static/knot_data/3nds/A/3nds_A_cysteine_knot.pdb.gz): 366 ms

reading 62 atoms

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Help Cysteine knot data interpretation Full screen

				Loop	Piercing
view details				3-c-17-b-41-c-41	3-b-24

Chain Sequence

LECHNQQSSQPPTTKTCSPGETNCYKKVWRDHRGTIIERGCGCPTVKPGIKLNCCTTDKCNN

sequence length	62
structure length	62
publication title	Conformational exchange is critical for the productivity of an oxidative folding intermediate with buried free cysteines. pubmed doi rcsb
molecule tags	Toxin
molecule keywords	Short neurotoxin 1
ec nomenclature
pdb deposition date	2010-06-08

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.10.60.10	Mainly Beta	Ribbon	CD59	CD59	3ndsA00

3NDSA
chains in the KnotProt database with same CATH superfamily

3NDSA
chains in the KnotProt database with same CATH topology

3NDSA
chains in the KnotProt database with same CATH homology

#chains in the KnotProt database with same CATH superfamily
 3NDS A; 
#chains in the KnotProt database with same CATH topology
 3NDS A; 
#chains in the KnotProt database with same CATH homology
 3NDS A;

None 1IQ9A 1JE9A 1NEAA 1NORA 1ONJA 1VB0A 2MJ4A 7LUWA
similar chains in the KnotProt database (40% sequence similarity)

7Z14F
similar chains in the pdb database (40% sequence similarity)

#similar chains in the KnotProt database (40% sequence similarity)

#similar chains, but unknotted
7LUW A; 
#similar chains in the pdb database (40% sequence similarity)
7Z14 F;