| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 19-257 | 239 | 1-18, 258-490 | 18 | 233 | knot |
Chain Sequence |
TPVTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGPEVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSIRGDFERQAGNVLQRLQRDPERDIYHTDNW-----------DCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 18-296 | 279 | 1-17, 297-479 | 17 | 183 | knot | ||||
| view details |
 |
3.2m | 18-253 | 236 | 1-17 | 262-479 | 254-261 | 17 | 218 | slipknot | ||
| view details |
|
4.1 | 8-261 | 254 | 1-7 | 267-479 | 262-266 | 7 | 213 | slipknot | ||
| view details |
|
3.2m | 17-262 | 246 | 1-16 | 274-479 | 263-273 | 16 | 206 | slipknot | ||
| view details |
|
3.2m | 15-273 | 259 | 1-14 | 275-479 | 274-274 | 14 | 205 | slipknot | ||
| view details |
|
3.2m | 17-277 | 261 | 1-16 | 295-479 | 278-294 | 16 | 185 | slipknot | ||
| view details |
|
4.1 | 20-306 | 287 | 307-479 | 1-17 | 18-19 | 17 | 172 | slipknot | ||
| view details |
|
4.1 | 21-306 | 286 | 307-479 | 1-19 | 20-20 | 19 | 172 | slipknot | ||
| view details |
 |
3.2 | 20-297 | 278 | 1-17, 306-479 | 18-19, 298-305 | 17 | 174 | slipknot |
| sequence length |
490
|
| structure length |
479
|
| publication title |
Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
pubmed doi rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Bacteriophytochrome
|
| source organism |
Pseudomonas aeruginosa
|
| missing residues |
392-402
|
| total genus |
 Genus: 143
|
| ec nomenclature |
ec
2.7.13.3: Histidine kinase. |
| pdb deposition date | 2010-06-14 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF08446 | PAS_2 | PAS fold |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
