| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 20-258 | 239 | 1-19, 259-493 | 19 | 235 | knot |
Chain Sequence |
ITPVTLANCEDEPIHVPGAIQPHGALVTLRADGMVLAASENIQALLGFVASPGSYLTQEQVGPEVLRMLEEGLTGNGPWSNSVETRIGEHLFDVIGHSYKEVFYLEFEIRTADTLSITSFTLNAQRIIAQVQLHNDTASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPMRVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVCSAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALAHPDDGIAALIPCDGALVMLGGRTLSIRGDFERQAGNVLQRLQRDPERDIYHTDNW----------GDCCGVLAIRFHRQESGWIFWFRHEEVHRIRWGGKPEKLLTIGPSGPRLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNH
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 18-297 | 280 | 1-17, 298-483 | 17 | 186 | knot | ||||
| view details |
 |
3.2m | 17-254 | 238 | 1-16 | 263-483 | 255-262 | 16 | 221 | slipknot | ||
| view details |
|
3.2m | 18-264 | 247 | 1-17 | 276-483 | 265-275 | 17 | 208 | slipknot | ||
| view details |
|
3.2m | 17-278 | 262 | 1-16 | 299-483 | 279-298 | 16 | 185 | slipknot | ||
| view details |
|
4.1 | 14-262 | 249 | 1-4, 265-483 | 5-13, 263-264 | 4 | 219 | slipknot | |||
| view details |
|
4.1 | 22-296 | 275 | 1-16, 440-483 | 17-21, 297-439 | 16 | 44 | slipknot | |||
| view details |
|
|
4.1 | 21-439 | 419 | 1-17, 443-483 | 18-20, 440-442 | 17 | 41 | slipknot | ||
| view details |
|
 |
3.2 | 22-443 | 422 | 444-483 | 1-17 | 18-21 | 17 | 39 | slipknot |
| sequence length |
493
|
| structure length |
483
|
| publication title |
Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
pubmed doi rcsb |
| molecule tags |
Signaling protein
|
| molecule keywords |
Bacteriophytochrome
|
| source organism |
Pseudomonas aeruginosa
|
| missing residues |
393-402
|
| total genus |
 Genus: 142
|
| ec nomenclature |
ec
2.7.13.3: Histidine kinase. |
| pdb deposition date | 2010-06-25 |
| KnotProt deposition date | 2014-08-20 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00360 | PHY | Phytochrome region |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
