| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 92-235 | 144 | 236-407 | 1-24 | 25-91 | 24 | 171 | slipknot | ||
| view details |
 |
41 | 21-316 | 296 | 1-20 | 335-407 | 317-334 | 20 | 73 | slipknot |
Chain Sequence |
RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLIS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 13-315 | 303 | 1-12 | 329-407 | 316-328 | 12 | 79 | slipknot | ||
| view details |
 |
2.1 | 46-344 | 299 | 345-407 | 1-23 | 24-45 | 23 | 62 | slipknot | ||
| view details |
 |
1.1 | 36-283 | 248 | 1-24, 294-407 | 25-35, 284-293 | 24 | 114 | slipknot | |||
| view details |
|
1.1 | 39-232 | 194 | 1-25, 246-407 | 26-38, 233-245 | 25 | 162 | slipknot | |||
| view details |
|
2.1 | 36-293 | 258 | 1-25, 302-407 | 26-35, 294-301 | 25 | 106 | slipknot | |||
| view details |
|
2.1 | 36-301 | 266 | 1-25, 303-407 | 26-35, 302-302 | 25 | 105 | slipknot | |||
| view details |
|
2.1 | 39-291 | 253 | 1-35, 302-407 | 36-38, 292-301 | 35 | 106 | slipknot | |||
| view details |
|
2.1 | 39-301 | 263 | 1-35, 303-407 | 36-38, 302-302 | 35 | 105 | slipknot | |||
| view details |
|
2.1 | 44-292 | 249 | 1-38, 303-407 | 39-43, 293-302 | 38 | 105 | slipknot | |||
| view details |
|
1.1 | 46-317 | 272 | 1-35, 329-407 | 36-45, 318-328 | 35 | 79 | slipknot | |||
| view details |
|
1.1 | 77-232 | 156 | 1-66, 247-407 | 67-76, 233-246 | 66 | 161 | slipknot | |||
| view details |
|
1.1 | 77-277 | 201 | 1-66, 290-407 | 67-76, 278-289 | 66 | 118 | slipknot | |||
| view details |
|
2.1 | 92-332 | 241 | 333-407 | 1-67 | 68-91 | 67 | 74 | slipknot | ||
| view details |
 |
3.1 | 78-289 | 212 | 1-68, 304-407 | 69-77, 290-303 | 68 | 104 | slipknot | |||
| view details |
|
3.1 | 86-290 | 205 | 1-72, 310-407 | 73-85, 291-309 | 72 | 98 | slipknot | |||
| view details |
|
3.1 | 85-243 | 159 | 1-74, 262-407 | 75-84, 244-261 | 74 | 146 | slipknot | |||
| view details |
|
3.1 | 86-243 | 158 | 1-84, 262-407 | 85-85, 244-261 | 84 | 146 | slipknot | |||
| view details |
|
2.1 | 92-291 | 200 | 1-82, 311-407 | 83-91, 292-310 | 82 | 97 | slipknot | |||
| view details |
|
2.1 | 92-310 | 219 | 1-82, 313-407 | 83-91, 311-312 | 82 | 95 | slipknot | |||
| view details |
|
2.1 | 92-312 | 221 | 1-82, 318-407 | 83-91, 313-317 | 82 | 90 | slipknot |
| sequence length |
407
|
| structure length |
407
|
| publication title |
Structure and mechanism of the uracil transporter UraA
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Uracil permease
|
| source organism |
Escherichia coli
|
| total genus |
 Genus: 139
|
| ec nomenclature | |
| pdb deposition date | 2011-01-20 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00860 | Xan_ur_permease | Permease family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
