| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
+ 31 | 17-171 | 155 | 1-16, 172-238 | 16 | 66 | slipknot |
| Fingerprint | Knot forming loop | Loop type | ||||
|---|---|---|---|---|---|---|
|
|
K +31 | Asp395 ... Cys481 <-> Cys675 ... Tyr526 <-> Bridging ionFe694 <-> Asp395 |
ion-based | |||
|
|
K +31 | Asp395 ... Cys481 <-> Cys675 ... Cys587 <-> Cys573 ... Tyr526 <-> Bridging ionFe694 <-> Asp395 |
ion-based | |||
|
|
K +31 | Asp395 ... Cys481 <-> Cys675 ... Cys630 <-> Cys625 ... Tyr526 <-> Bridging ionFe694 <-> Asp395 |
ion-based | |||
|
|
K +31 | Asp395 ... Cys481 <-> Cys675 ... Cys630 <-> Cys625 ... Cys587 <-> Cys573 ... Tyr526 <-> Bridging ionFe694 <-> Asp395 |
ion-based |
Chain Sequence |
YTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFDEFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVAFVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLFNDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type |
|---|
| sequence length |
335
|
| structure length |
335
|
| publication title |
Crystal Structure of C-lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution
rcsb |
| molecule tags |
Metal binding protein
|
| molecule keywords |
Lactotransferrin
|
| total genus |
 Genus: 118
|
| ec nomenclature |
ec
3.4.21.-: |
| pdb deposition date | 2011-12-16 |
| KnotProt deposition date | 2018-11-02 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00405 | Transferrin | Transferrin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
