4BPQA

Structure and substrate induced conformational changes of the secondary citrate-sodium symporter cits revealed by electron crystallography
Slipknot S -31 -52 -75 -51
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 102-157 56 1-101, 158-418 101 260 slipknot
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-51 25-352 328 1-24 381-418 353-380 24 38 slipknot
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-75 25-386 362 1-24, 387-418 24 31 slipknot
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-52 25-331 307 1-24 342-418 332-341 24 77 slipknot
Chain Sequence
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Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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7.5m 22-280 259 1-21, 281-304 21 24 knot
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3.1m 22-118 97 1-21 188-304 119-187 21 117 slipknot
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4.2 22-188 167 1-21 196-304 189-195 21 109 slipknot
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3.1m 22-206 185 1-21 241-304 207-240 21 64 slipknot
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5.2m 22-240 219 1-21 248-304 241-247 21 57 slipknot
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5.1m 19-268 250 1-18 275-304 269-274 18 30 slipknot
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4.2 13-247 235 1-5, 250-304 6-12, 248-249 5 55 slipknot
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4.2 13-249 237 1-5, 251-304 6-12, 250-250 5 54 slipknot
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5.8 22-253 232 1-10, 257-304 11-21, 254-256 10 48 slipknot
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4.2 18-247 230 1-13, 251-304 14-17, 248-250 13 54 slipknot
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6.18m 22-265 244 1-15, 269-304 16-21, 266-268 15 36 slipknot
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3.1m 27-268 242 1-21, 276-304 22-26, 269-275 21 29 slipknot
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2.1m 26-275 250 1-21, 279-304 22-25, 276-278 21 26 slipknot
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3.1m 28-279 252 1-21, 287-304 22-27, 280-286 21 18 slipknot
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3.1m 27-286 260 287-304 1-21 22-26 21 17 slipknot

KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling