4CE4z

39s large subunit of the porcine mitochondrial ribosome
Genus: 149
Knot K 41 +62 +31 41

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+62 28-392 365 1-27 409-426 393-408 27 18 slipknot
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+31 186-392 207 1-153, 409-426 154-185, 393-408 153 18 slipknot
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41 28-346 319 1-27, 347-426 27 80 knot
Chain Sequence
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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4.1 28-408 381 1-27, 409-426 27 18 knot
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4.1 28-346 319 1-27 360-426 347-359 27 67 slipknot
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4.1 28-376 349 1-27 393-426 377-392 27 34 slipknot
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6.2 28-392 365 1-27 409-426 393-408 27 18 slipknot
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2.1 160-392 233 1-145, 409-426 146-159, 393-408 145 18 slipknot
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2.1 164-394 231 1-159, 402-426 160-163, 395-401 159 25 slipknot
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2.1 164-401 238 1-159, 404-426 160-163, 402-403 159 23 slipknot
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2.1 162-403 242 1-159, 409-426 160-161, 404-408 159 18 slipknot
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3.1 185-392 208 1-162, 409-426 163-184, 393-408 162 18 slipknot
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3.1 186-392 207 1-184, 409-426 185-185, 393-408 184 18 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling