4CYRA

G4 mutant of pas, arylsulfatase from pseudomonas aeruginosa
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 8-315 308 1-7 383-526 316-382 7 144 slipknot
Chain Sequence
KRPNFLVIVADDLGFSDIGTFGGEIATPNLDALAIAGLRLTDFHTASA-SPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFALLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLDFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWGLFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSDTGVVE
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 7-319 313 1-6 355-525 320-354 6 171 slipknot
view details
3.1 4-370 367 1-3 377-525 371-376 3 149 slipknot
view details
2.1 6-378 373 1-5 383-525 379-382 5 143 slipknot
missing residues 49
publication title G4 Mutant of Pas, Arylsulfatase from Pseudomonas Aeruginosa
rcsb
structure length 525
molecule tags Hydrolase
source organism Pseudomonas aeruginosa
sequence length 526
total genus Genus: 180
molecule keywords ARYLSULFATASE
ec nomenclature
pdb deposition date 2014-04-14
KnotProt deposition date 2015-04-29
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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