| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-222 | 177 | 223-456 | 1-31 | 32-45 | 31 | 233 | slipknot | ||
| view details |
 |
41 | 28-260 | 233 | 1-27 | 305-456 | 261-304 | 27 | 152 | slipknot |
Chain Sequence |
SLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 18-272 | 255 | 1-17 | 294-456 | 273-293 | 17 | 163 | slipknot | ||
| view details |
 |
3.2 | 22-290 | 269 | 1-21 | 302-456 | 291-301 | 21 | 155 | slipknot | ||
| view details |
|
3.2 | 22-301 | 280 | 1-21 | 305-456 | 302-304 | 21 | 152 | slipknot | ||
| view details |
|
4.1 | 18-269 | 252 | 1-9, 273-456 | 10-17, 270-272 | 9 | 184 | slipknot | |||
| view details |
 |
3.2m | 32-283 | 252 | 1-17, 300-456 | 18-31, 284-299 | 17 | 157 | slipknot | |||
| view details |
|
3.2m | 30-299 | 270 | 1-21, 302-456 | 22-29, 300-301 | 21 | 155 | slipknot | |||
| view details |
|
3.2 | 32-301 | 270 | 1-21, 303-456 | 22-31, 302-302 | 21 | 154 | slipknot | |||
| view details |
 |
2.1 | 56-220 | 165 | 1-26, 242-456 | 27-55, 221-241 | 26 | 215 | slipknot | |||
| view details |
 |
2.3 | 33-244 | 212 | 1-26, 260-456 | 27-32, 245-259 | 26 | 197 | slipknot | |||
| view details |
|
2.1 | 53-305 | 253 | 1-26, 348-456 | 27-52, 306-347 | 26 | 109 | slipknot | |||
| view details |
|
2.1 | 56-349 | 294 | 350-456 | 1-28 | 29-55 | 28 | 106 | slipknot | ||
| view details |
|
2.1 | 37-244 | 208 | 1-32, 254-456 | 33-36, 245-253 | 32 | 203 | slipknot | |||
| view details |
 |
1.1 | 41-248 | 208 | 1-32, 259-456 | 33-40, 249-258 | 32 | 198 | slipknot | |||
| view details |
|
1.1 | 41-258 | 218 | 1-32, 262-456 | 33-40, 259-261 | 32 | 195 | slipknot | |||
| view details |
|
1.1 | 54-244 | 191 | 1-36, 262-456 | 37-53, 245-261 | 36 | 195 | slipknot | |||
| view details |
|
1.1 | 53-261 | 209 | 1-33, 264-456 | 34-52, 262-263 | 33 | 193 | slipknot | |||
| view details |
|
1.1 | 41-241 | 201 | 1-35, 245-456 | 36-40, 242-244 | 35 | 212 | slipknot |
| sequence length |
456
|
| structure length |
456
|
| publication title |
Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
HYDANTOIN TRANSPORT PROTEIN
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 177
|
| ec nomenclature | |
| pdb deposition date | 2014-05-01 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
