| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-220 | 175 | 221-456 | 1-30 | 31-45 | 30 | 235 | slipknot | ||
| view details |
 |
41 | 28-260 | 233 | 1-27 | 305-456 | 261-304 | 27 | 152 | slipknot |
Chain Sequence |
SLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 19-254 | 236 | 1-18 | 268-456 | 255-267 | 18 | 189 | slipknot | ||
| view details |
 |
4.1 | 19-273 | 255 | 1-18 | 295-456 | 274-294 | 18 | 162 | slipknot | ||
| view details |
|
3.2 | 18-294 | 277 | 1-17 | 303-456 | 295-302 | 17 | 154 | slipknot | ||
| view details |
|
3.2 | 17-302 | 286 | 1-1, 304-456 | 2-16, 303-303 | 1 | 153 | slipknot | |||
| view details |
|
3.2 | 19-294 | 276 | 1-17, 302-456 | 18-18, 295-301 | 17 | 155 | slipknot | |||
| view details |
|
4.1 | 19-270 | 252 | 1-4, 274-456 | 5-18, 271-273 | 4 | 183 | slipknot | |||
| view details |
|
4.1 | 22-265 | 244 | 1-12, 271-456 | 13-21, 266-270 | 12 | 186 | slipknot | |||
| view details |
|
4.1 | 29-273 | 245 | 1-18, 301-456 | 19-28, 274-300 | 18 | 156 | slipknot | |||
| view details |
|
3.2 | 29-300 | 272 | 1-19, 303-456 | 20-28, 301-302 | 19 | 154 | slipknot | |||
| view details |
|
3.2 | 29-302 | 274 | 1-26, 304-456 | 27-28, 303-303 | 26 | 153 | slipknot | |||
| view details |
 |
2.3 | 30-257 | 228 | 1-22, 268-456 | 23-29, 258-267 | 22 | 189 | slipknot | |||
| view details |
 |
2.1 | 53-219 | 167 | 1-26, 245-456 | 27-52, 220-244 | 26 | 212 | slipknot | |||
| view details |
 |
1.1 | 37-252 | 216 | 1-28, 260-456 | 29-36, 253-259 | 28 | 197 | slipknot | |||
| view details |
|
2.1 | 56-307 | 252 | 308-456 | 1-28 | 29-55 | 28 | 148 | slipknot | ||
| view details |
|
1.1 | 56-244 | 189 | 1-34, 263-456 | 35-55, 245-262 | 34 | 194 | slipknot |
| sequence length |
456
|
| structure length |
456
|
| publication title |
Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
HYDANTOIN TRANSPORT PROTEIN
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 177
|
| ec nomenclature | |
| pdb deposition date | 2014-05-01 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
