| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-220 | 169 | 221-456 | 1-29 | 30-51 | 29 | 235 | slipknot | ||
| view details |
 |
41 | 28-260 | 233 | 1-27 | 305-456 | 261-304 | 27 | 152 | slipknot |
Chain Sequence |
SLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYL
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 22-253 | 232 | 1-21 | 268-456 | 254-267 | 21 | 189 | slipknot | ||
| view details |
 |
4.1 | 20-272 | 253 | 1-19 | 296-456 | 273-295 | 19 | 161 | slipknot | ||
| view details |
|
3.2 | 18-295 | 278 | 1-17 | 300-456 | 296-299 | 17 | 157 | slipknot | ||
| view details |
|
3.2 | 20-295 | 276 | 1-19 | 305-456 | 296-304 | 19 | 152 | slipknot | ||
| view details |
|
4.1 | 23-265 | 243 | 1-2, 271-456 | 3-22, 266-270 | 2 | 186 | slipknot | |||
| view details |
|
4.1 | 22-270 | 249 | 1-2, 273-456 | 3-21, 271-272 | 2 | 184 | slipknot | |||
| view details |
|
3.2 | 21-272 | 252 | 1-19, 276-456 | 20-20, 273-275 | 19 | 181 | slipknot | |||
| view details |
|
3.2 | 31-281 | 251 | 1-19, 298-456 | 20-30, 282-297 | 19 | 159 | slipknot | |||
| view details |
|
3.2 | 32-281 | 250 | 1-30, 298-456 | 31-31, 282-297 | 30 | 159 | slipknot | |||
| view details |
 |
1.1 | 30-252 | 223 | 1-23, 265-456 | 24-29, 253-264 | 23 | 192 | slipknot | |||
| view details |
|
3.2 | 30-271 | 242 | 1-24, 278-456 | 25-29, 272-277 | 24 | 179 | slipknot | |||
| view details |
 |
2.1 | 49-305 | 257 | 1-28, 347-456 | 29-48, 306-346 | 28 | 110 | slipknot | |||
| view details |
|
2.1 | 58-350 | 293 | 351-456 | 1-28 | 29-57 | 28 | 105 | slipknot | ||
| view details |
|
2.1 | 44-221 | 178 | 1-29, 247-456 | 30-43, 222-246 | 29 | 210 | slipknot | |||
| view details |
|
1.1 | 53-245 | 193 | 1-33, 263-456 | 34-52, 246-262 | 33 | 194 | slipknot | |||
| view details |
|
2.1 | 55-217 | 163 | 1-44, 243-456 | 45-54, 218-242 | 44 | 214 | slipknot |
| sequence length |
456
|
| structure length |
456
|
| publication title |
Molecular Mechanism of Ligand Recognition by Membrane Transport Protein, Mhp1.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
HYDANTOIN TRANSPORT PROTEIN
|
| source organism |
Microbacterium liquefaciens
|
| total genus |
 Genus: 178
|
| ec nomenclature | |
| pdb deposition date | 2014-05-01 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
