4G1EA

Crystal structure of integrin alpha v beta 3 with coil-coiled tag.
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
  • Chain breaks within knot 41 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Genus: 190
Alphaknot: P06756
Knot K +31 +31 41 +31 +31

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Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 800-901 102 1-799, 902-994 799 93 knot
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41 775-922 148 1-752, 949-994 753-774, 923-948 752 46 slipknot
Chain Sequence
FNLDVDSPAEYSGPEGSYFGFAVDFFVPSASSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSTRRCQPIEFDATGNRDYAKDDPLEFKSHQWFGASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSQDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEGQWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPRKLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRLDYRTAADTTGLQPILNQFTPANISRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYI-DDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGVVRNNEALARLSCAFKTENQTRQVVCDLGNPMKAGTQLLAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSHKVDLAVLAAVEIRGVSSPDHVFLPIPNWEHKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLYILHYDIDGPMNCTSDMEINPLRIKISSLT--EKNDTVAGDI------------------HTLGCGVAQCLKIVCQVGRLDRGKSAILYVKSLLWTETFMNKENQNHSYSLKSSASFNVIEFPYKNLPIEDITNSTLVTTNVTWGIQPAPCEKELQALEKENAQLEWELQA---------LEKEL
Whole chain analysis

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Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1


  Help Knotoid subchains data interpretation Full screen
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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3.1m 744-929 186 1-743, 930-964 743 35 knot
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3.1m 352-884 533 1-3, 897-964 4-351, 885-896 3 68 slipknot
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3.1m 362-884 523 1-351, 897-964 352-361, 885-896 351 68 slipknot
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2.1m 606-883 278 1-294, 896-964 295-605, 884-895 294 69 slipknot
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3.1m 606-895 290 1-361, 897-964 362-605, 896-896 361 68 slipknot
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3.1m 621-883 263 1-605, 896-964 606-620, 884-895 605 69 slipknot
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3.1m 733-883 151 1-621, 896-964 622-732, 884-895 621 69 slipknot
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3.1m 733-895 163 1-621, 897-964 622-732, 896-896 621 68 slipknot
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3.1m 743-884 142 1-732, 897-964 733-742, 885-896 732 68 slipknot
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2.1m 753-931 179 932-964 1-743 744-752 743 32 slipknot
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4.1 774-902 129 1-752, 925-964 753-773, 903-924 752 40 slipknot
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3.1m 796-931 136 932-964 1-782 783-795 782 32 slipknot
How to cite
KnotProt | Interdisciplinary Laboratory of Biological Systems Modelling