| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 77-273 | 197 | 1-76, 274-395 | 76 | 122 | knot |
Chain Sequence |
DFTKEKFQLLAISSLTLPWLISLAFNYHHPALTQTLLSGLAVVSASFLISWAAETAEMDVPRSFSLAIVALLAVLPEYAVDGYFAWKAGSVGGEYVHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRRFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQSLPLDARQSEEVLLTAAQSLFAVAILLDLKISWKEASALFLLFIVQLLFPGVEVRYIISAIYIILSLPILFAKRKEIVESFRTVKRLISLE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 45-320 | 276 | 1-44, 321-395 | 44 | 75 | knot | ||||
| view details |
|
3.1 | 42-298 | 257 | 1-28, 320-395 | 29-41, 299-319 | 28 | 76 | slipknot | |||
| view details |
 |
2.1 | 56-290 | 235 | 1-32, 338-395 | 33-55, 291-337 | 32 | 58 | slipknot | |||
| view details |
|
2.1 | 56-337 | 282 | 1-44, 339-395 | 45-55, 338-338 | 44 | 57 | slipknot | |||
| view details |
|
2.1 | 56-338 | 283 | 1-44, 384-395 | 45-55, 339-383 | 44 | 12 | slipknot | |||
| view details |
|
2.1 | 56-383 | 328 | 384-395 | 1-44 | 45-55 | 44 | 11 | slipknot | ||
| view details |
|
2.1 | 57-320 | 264 | 1-55, 383-395 | 56-56, 321-382 | 55 | 13 | slipknot | |||
| view details |
|
2.1 | 57-384 | 328 | 1-55, 394-395 | 56-56, 385-393 | 55 | 2 | slipknot | |||
| view details |
|
3.1 | 58-320 | 263 | 1-56, 381-395 | 57-57, 321-380 | 56 | 15 | slipknot | |||
| view details |
|
2.1 | 58-387 | 330 | 1-56, 393-395 | 57-57, 388-392 | 56 | 3 | slipknot | |||
| view details |
|
2.1 | 57-291 | 235 | 1-55, 320-395 | 56-56, 292-319 | 55 | 76 | slipknot |
| sequence length |
395
|
| structure length |
395
|
| publication title |
Structural Basis for the Counter-Transport Mechanism of a H+/Ca2+ Exchanger
pubmed doi rcsb |
| molecule tags |
Membrane protein
|
| molecule keywords |
Putative uncharacterized protein
|
| source organism |
Archaeoglobus fulgidus
|
| total genus |
 Genus: 159
|
| ec nomenclature | |
| pdb deposition date | 2013-05-14 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
