| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 33-287 | 255 | 1-32, 288-402 | 32 | 115 | knot |
Chain Sequence |
KVRNIVVEELVRTPVEMQKVELVERKGIGHPDSIADGIAEAVSRALSREYVKRYGIILHHNTDQVEVVGGRAYPQFGGGEVIKPIYILLSGRAVEMVDREFFPVHEIALKAAKDYLRKAVRHLDLEHHVIIDSRIGQGSVDLVGVFNKAKKNPIPLANDTSFGVGYAPLSETEKIVLETEKYLNSDEFKKKYPAVGEDIKVMGLRKGDEIDLTIAAAIVDSEVDNPDDYMAVKEAIYEAAKGIVESHTERPTNIYVNTADDPKEGIYYITVTGTSAEAGDDGSVGRGNRVNGLITPNRHMSMEAAAGKNPVSHVGKIYNILSMLIANDIAEQVEGVEEVYVRILSQIGKPIDEPLVASVQIIPKKGYSIDVLQKPAYEIADEWLANITKIQKMILEDKVNVF
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 22-389 | 368 | 1-21, 390-402 | 21 | 13 | knot | ||||
| view details |
|
2.1 | 24-283 | 260 | 1-23 | 297-402 | 284-296 | 23 | 106 | slipknot | ||
| view details |
 |
3.1 | 24-323 | 300 | 1-23 | 390-402 | 324-389 | 23 | 13 | slipknot | ||
| view details |
|
2.1 | 27-300 | 274 | 1-2, 324-402 | 3-26, 301-323 | 2 | 79 | slipknot | |||
| view details |
|
2.1 | 27-323 | 297 | 1-23, 325-402 | 24-26, 324-324 | 23 | 78 | slipknot | |||
| view details |
|
2.1 | 27-324 | 298 | 1-23, 335-402 | 24-26, 325-334 | 23 | 68 | slipknot | |||
| view details |
|
3.1 | 23-389 | 367 | 390-402 | 1-21 | 22-22 | 21 | 12 | slipknot | ||
| view details |
 |
1.1 | 32-302 | 271 | 1-26, 325-402 | 27-31, 303-324 | 26 | 78 | slipknot | |||
| view details |
|
2.1 | 32-324 | 293 | 1-26, 335-402 | 27-31, 325-334 | 26 | 68 | slipknot | |||
| view details |
|
2.1 | 32-334 | 303 | 1-23, 382-402 | 24-31, 335-381 | 23 | 21 | slipknot | |||
| view details |
|
2.1 | 34-323 | 290 | 1-23, 389-402 | 24-33, 324-388 | 23 | 14 | slipknot | |||
| view details |
|
2.1 | 34-388 | 355 | 1-22, 391-402 | 23-33, 389-390 | 22 | 12 | slipknot | |||
| view details |
|
2.1 | 34-390 | 357 | 1-22, 392-402 | 23-33, 391-391 | 22 | 11 | slipknot | |||
| view details |
|
2.1 | 35-316 | 282 | 1-31, 335-402 | 32-34, 317-334 | 31 | 68 | slipknot | |||
| view details |
|
2.1 | 35-335 | 301 | 1-33, 382-402 | 34-34, 336-381 | 33 | 21 | slipknot | |||
| view details |
|
2.1 | 36-329 | 294 | 1-34, 382-402 | 35-35, 330-381 | 34 | 21 | slipknot |
| sequence length |
402
|
| structure length |
402
|
| publication title |
Structural and functional characterisation of the methionine adenosyltransferase from Thermococcus kodakarensis.
pubmed doi rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
S-adenosylmethionine synthase
|
| source organism |
Thermococcus kodakarensis
|
| total genus |
 Genus: 149
|
| ec nomenclature |
ec
2.5.1.6: Methionine adenosyltransferase. |
| pdb deposition date | 2013-06-09 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01941 | AdoMet_Synthase | S-adenosylmethionine synthetase (AdoMet synthetase) |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
