| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 172-218 | 47 | 1-171, 219-247 | 171 | 29 | knot |
Chain Sequence |
VAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQ---GGLRARVLRRWSVPPVRPPVTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWD
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 166-219 | 54 | 1-165, 220-244 | 165 | 25 | knot | ||||
| view details |
 |
2.1 | 166-213 | 48 | 1-165 | 220-244 | 214-219 | 165 | 25 | slipknot | ||
| view details |
|
3.1 | 167-216 | 50 | 217-244 | 1-165 | 166-166 | 165 | 27 | slipknot | ||
| view details |
|
3.1 | 168-217 | 50 | 218-244 | 1-166 | 167-167 | 166 | 26 | slipknot | ||
| view details |
|
3.1 | 169-218 | 50 | 219-244 | 1-167 | 168-168 | 167 | 25 | slipknot | ||
| view details |
|
2.1 | 172-218 | 47 | 1-168, 244-244 | 169-171, 219-243 | 168 | 1 | slipknot |
| sequence length |
247
|
| structure length |
244
|
| publication title |
The structure of Rv2372c identifies an RsmE-like methyltransferase from Mycobacterium tuberculosis
pubmed doi rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
Ribosomal RNA small subunit methyltransferase E
|
| source organism |
Mycobacterium tuberculosis
|
| missing residues |
56-58
|
| total genus |
 Genus: 66
|
| ec nomenclature |
ec
2.1.1.193: 16S rRNA (uracil(1498)-N(3))-methyltransferase. |
| pdb deposition date | 2013-06-12 |
| KnotProt deposition date | 2014-07-31 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
