| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 39-268 | 230 | 269-532 | 1-22 | 23-38 | 22 | 263 | slipknot | ||
| view details |
 |
41 | 14-295 | 282 | 1-13 | 350-532 | 296-349 | 13 | 183 | slipknot |
Chain Sequence |
DERETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLAVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPNCRPFESQGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAALLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWADAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVATEGPGLVFVVYPAAIATMPASTFWALIFFMMLATLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRYAAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYLLIGYEPLTYADYVYPSWANALGWCIAGSSVVMIPAVAIFKLLSTPGSLRQRFTILTTPWRD
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 13-290 | 278 | 1-12 | 302-532 | 291-301 | 12 | 231 | slipknot | ||
| view details |
 |
4.1 | 10-301 | 292 | 1-9 | 315-532 | 302-314 | 9 | 218 | slipknot | ||
| view details |
|
3.2 | 9-318 | 310 | 1-8 | 345-532 | 319-344 | 8 | 188 | slipknot | ||
| view details |
|
4.1 | 20-331 | 312 | 1-19 | 349-532 | 332-348 | 19 | 184 | slipknot | ||
| view details |
|
4.1 | 20-348 | 329 | 1-19 | 353-532 | 349-352 | 19 | 180 | slipknot | ||
| view details |
|
3.2 | 21-331 | 311 | 1-19, 349-532 | 20-20, 332-348 | 19 | 184 | slipknot | |||
| view details |
|
3.2 | 22-332 | 311 | 1-20, 349-532 | 21-21, 333-348 | 20 | 184 | slipknot | |||
| view details |
|
3.2 | 22-349 | 328 | 1-20, 353-532 | 21-21, 350-352 | 20 | 180 | slipknot | |||
| view details |
|
3.2 | 12-316 | 305 | 1-5, 324-532 | 6-11, 317-323 | 5 | 209 | slipknot | |||
| view details |
|
3.2 | 16-328 | 313 | 1-8, 332-532 | 9-15, 329-331 | 8 | 201 | slipknot | |||
| view details |
 |
3.2m | 18-301 | 284 | 1-10, 308-532 | 11-17, 302-307 | 10 | 225 | slipknot | |||
| view details |
 |
2.1 | 43-357 | 315 | 1-18, 396-532 | 19-42, 358-395 | 18 | 137 | slipknot | |||
| view details |
|
2.1 | 44-417 | 374 | 418-532 | 1-18 | 19-43 | 18 | 114 | slipknot | ||
| view details |
|
2.1 | 35-263 | 229 | 1-20, 277-532 | 21-34, 264-276 | 20 | 256 | slipknot | |||
| view details |
 |
1.1 | 31-250 | 220 | 1-22, 259-532 | 23-30, 251-258 | 22 | 274 | slipknot | |||
| view details |
|
1.1 | 44-280 | 237 | 1-24, 299-532 | 25-43, 281-298 | 24 | 234 | slipknot | |||
| view details |
|
1.1 | 39-248 | 210 | 1-25, 261-532 | 26-38, 249-260 | 25 | 272 | slipknot | |||
| view details |
|
2.1 | 40-400 | 361 | 1-32, 410-532 | 33-39, 401-409 | 32 | 123 | slipknot |
| sequence length |
532
|
| structure length |
532
|
| publication title |
X-ray structure of dopamine transporter elucidates antidepressant mechanism.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Transporter
|
| source organism |
Drosophila melanogaster
|
| total genus |
 Genus: 218
|
| ec nomenclature | |
| pdb deposition date | 2013-08-06 |
| KnotProt deposition date | 2014-07-31 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00209 | SNF | Sodium:neurotransmitter symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
