| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 53-320 | 268 | 1-52 | 367-411 | 321-366 | 52 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 43-309 | 267 | 1-42 | 330-411 | 310-329 | 42 | 82 | slipknot | ||
| view details |
|
2.1 | 40-331 | 292 | 1-39 | 350-411 | 332-349 | 39 | 62 | slipknot | ||
| view details |
|
2.1 | 42-354 | 313 | 1-41 | 371-411 | 355-370 | 41 | 41 | slipknot | ||
| view details |
 |
3.1 | 43-329 | 287 | 1-20, 336-411 | 21-42, 330-335 | 20 | 76 | slipknot | |||
| view details |
 |
1.1 | 54-311 | 258 | 1-42, 330-411 | 43-53, 312-329 | 42 | 82 | slipknot | |||
| view details |
|
1.1 | 63-356 | 294 | 1-41, 368-411 | 42-62, 357-367 | 41 | 44 | slipknot | |||
| view details |
|
2.1 | 62-328 | 267 | 1-51, 336-411 | 52-61, 329-335 | 51 | 76 | slipknot | |||
| view details |
|
1.1 | 64-333 | 270 | 1-56, 344-411 | 57-63, 334-343 | 56 | 68 | slipknot | |||
| view details |
|
1.1 | 63-343 | 281 | 1-56, 346-411 | 57-62, 344-345 | 56 | 66 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
