| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 53-320 | 268 | 1-52 | 367-411 | 321-366 | 52 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 43-310 | 268 | 1-42 | 329-411 | 311-328 | 42 | 83 | slipknot | ||
| view details |
|
2.1 | 43-331 | 289 | 1-42 | 351-411 | 332-350 | 42 | 61 | slipknot | ||
| view details |
|
2.1 | 42-356 | 315 | 1-41 | 373-411 | 357-372 | 41 | 39 | slipknot | ||
| view details |
|
2.1 | 44-331 | 288 | 1-42, 347-411 | 43-43, 332-346 | 42 | 65 | slipknot | |||
| view details |
|
2.1 | 53-315 | 263 | 1-42, 327-411 | 43-52, 316-326 | 42 | 85 | slipknot | |||
| view details |
 |
1.1 | 54-316 | 263 | 1-52, 327-411 | 53-53, 317-326 | 52 | 85 | slipknot | |||
| view details |
|
1.1 | 60-357 | 298 | 1-44, 370-411 | 45-59, 358-369 | 44 | 42 | slipknot | |||
| view details |
|
2.1 | 62-334 | 273 | 1-51, 346-411 | 52-61, 335-345 | 51 | 66 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
