| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 53-321 | 269 | 1-52 | 367-411 | 322-366 | 52 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 42-309 | 268 | 1-41 | 331-411 | 310-330 | 41 | 81 | slipknot | ||
| view details |
|
2.1 | 41-335 | 295 | 1-40 | 348-411 | 336-347 | 40 | 64 | slipknot | ||
| view details |
|
2.1 | 43-354 | 312 | 1-42 | 370-411 | 355-369 | 42 | 42 | slipknot | ||
| view details |
 |
1.1 | 51-314 | 264 | 1-41, 329-411 | 42-50, 315-328 | 41 | 83 | slipknot | |||
| view details |
|
1.1 | 55-359 | 305 | 1-42, 368-411 | 43-54, 360-367 | 42 | 44 | slipknot | |||
| view details |
|
1.1 | 54-314 | 261 | 1-50, 329-411 | 51-53, 315-328 | 50 | 83 | slipknot | |||
| view details |
|
1.1 | 62-357 | 296 | 1-50, 369-411 | 51-61, 358-368 | 50 | 43 | slipknot | |||
| view details |
|
1.1 | 63-334 | 272 | 1-52, 346-411 | 53-62, 335-345 | 52 | 66 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| D | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
