| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 56-321 | 266 | 1-55 | 367-411 | 322-366 | 55 | 45 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGATMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 44-310 | 267 | 1-43 | 333-411 | 311-332 | 43 | 79 | slipknot | ||
| view details |
|
2.1 | 42-353 | 312 | 1-41 | 370-411 | 354-369 | 41 | 42 | slipknot | ||
| view details |
 |
3.1 | 50-333 | 284 | 1-41, 344-411 | 42-49, 334-343 | 41 | 68 | slipknot | |||
| view details |
 |
1.1 | 52-359 | 308 | 1-42, 368-411 | 43-51, 360-367 | 42 | 44 | slipknot | |||
| view details |
|
1.1 | 58-313 | 256 | 1-43, 327-411 | 44-57, 314-326 | 43 | 85 | slipknot | |||
| view details |
|
2.1 | 63-357 | 295 | 1-44, 370-411 | 45-62, 358-369 | 44 | 42 | slipknot | |||
| view details |
|
2.1 | 58-326 | 269 | 1-48, 333-411 | 49-57, 327-332 | 48 | 79 | slipknot | |||
| view details |
|
2.1 | 64-324 | 261 | 1-52, 334-411 | 53-63, 325-333 | 52 | 78 | slipknot | |||
| view details |
|
2.1 | 64-333 | 270 | 1-53, 344-411 | 54-63, 334-343 | 53 | 68 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-12 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| F | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
