| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-320 | 269 | 1-51 | 339-414 | 321-338 | 51 | 76 | slipknot |
Chain Sequence |
YIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGTLV
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 43-307 | 265 | 1-42 | 345-414 | 308-344 | 42 | 70 | slipknot | ||
| view details |
|
2.1 | 37-358 | 322 | 1-27, 366-414 | 28-36, 359-365 | 27 | 49 | slipknot | |||
| view details |
|
2.1 | 52-326 | 275 | 1-44, 340-414 | 45-51, 327-339 | 44 | 75 | slipknot | |||
| view details |
 |
1.1 | 60-328 | 269 | 1-47, 341-414 | 48-59, 329-340 | 47 | 74 | slipknot | |||
| view details |
|
1.1 | 59-314 | 256 | 1-48, 328-414 | 49-58, 315-327 | 48 | 87 | slipknot | |||
| view details |
|
2.1 | 59-327 | 269 | 1-51, 329-414 | 52-58, 328-328 | 51 | 86 | slipknot | |||
| view details |
|
1.1 | 61-328 | 268 | 1-59, 341-414 | 60-60, 329-340 | 59 | 74 | slipknot |
| sequence length |
414
|
| structure length |
414
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| total genus |
 Genus: 158
|
| ec nomenclature | |
| pdb deposition date | 2014-02-25 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
