| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-321 | 276 | 1-45 | 336-408 | 322-335 | 45 | 73 | slipknot |
Chain Sequence |
EYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 44-306 | 263 | 1-43 | 343-408 | 307-342 | 43 | 66 | slipknot | ||
| view details |
|
2.1 | 30-355 | 326 | 1-18, 363-408 | 19-29, 356-362 | 18 | 46 | slipknot | |||
| view details |
 |
1.1 | 57-314 | 258 | 1-43, 323-408 | 44-56, 315-322 | 43 | 86 | slipknot | |||
| view details |
|
2.1 | 53-322 | 270 | 1-44, 325-408 | 45-52, 323-324 | 44 | 84 | slipknot | |||
| view details |
|
2.1 | 53-324 | 272 | 1-45, 328-408 | 46-52, 325-327 | 45 | 81 | slipknot | |||
| view details |
|
2.1 | 57-326 | 270 | 1-47, 341-408 | 48-56, 327-340 | 47 | 68 | slipknot | |||
| view details |
|
1.1 | 59-326 | 268 | 1-56, 341-408 | 57-58, 327-340 | 56 | 68 | slipknot | |||
| view details |
|
1.1 | 57-357 | 301 | 1-50, 364-408 | 51-56, 358-363 | 50 | 45 | slipknot |
| sequence length |
408
|
| structure length |
408
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-25 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
