| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 47-317 | 271 | 1-46 | 336-408 | 318-335 | 46 | 73 | slipknot |
Chain Sequence |
EYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 49-308 | 260 | 1-48 | 344-408 | 309-343 | 48 | 65 | slipknot | ||
| view details |
|
2.1 | 40-302 | 263 | 1-29, 308-408 | 30-39, 303-307 | 29 | 101 | slipknot | |||
| view details |
 |
1.1 | 58-311 | 254 | 1-48, 322-408 | 49-57, 312-321 | 48 | 87 | slipknot | |||
| view details |
|
1.1 | 58-321 | 264 | 1-48, 325-408 | 49-57, 322-324 | 48 | 84 | slipknot | |||
| view details |
|
1.1 | 58-324 | 267 | 1-48, 326-408 | 49-57, 325-325 | 48 | 83 | slipknot | |||
| view details |
|
1.1 | 51-310 | 260 | 1-48, 312-408 | 49-50, 311-311 | 48 | 97 | slipknot | |||
| view details |
|
2.1 | 59-328 | 270 | 1-48, 337-408 | 49-58, 329-336 | 48 | 72 | slipknot |
| sequence length |
408
|
| structure length |
408
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-25 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
