| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 52-321 | 270 | 1-51 | 339-413 | 322-338 | 51 | 75 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEGT
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 46-314 | 269 | 1-45 | 346-413 | 315-345 | 45 | 68 | slipknot | ||
| view details |
 |
2.1 | 12-360 | 349 | 1-11 | 370-413 | 361-369 | 11 | 44 | slipknot | ||
| view details |
 |
1.1 | 61-314 | 254 | 1-48, 326-413 | 49-60, 315-325 | 48 | 88 | slipknot | |||
| view details |
|
1.1 | 61-325 | 265 | 1-48, 329-413 | 49-60, 326-328 | 48 | 85 | slipknot | |||
| view details |
|
1.1 | 61-328 | 268 | 1-48, 331-413 | 49-60, 329-330 | 48 | 83 | slipknot | |||
| view details |
|
1.1 | 60-331 | 272 | 1-49, 343-413 | 50-59, 332-342 | 49 | 71 | slipknot | |||
| view details |
|
1.1 | 60-342 | 283 | 1-50, 344-413 | 51-59, 343-343 | 50 | 70 | slipknot | |||
| view details |
|
1.1 | 62-331 | 270 | 1-59, 343-413 | 60-61, 332-342 | 59 | 71 | slipknot |
| sequence length |
413
|
| structure length |
413
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-02-25 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
