| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 48-323 | 276 | 1-47 | 338-411 | 324-337 | 47 | 74 | slipknot |
Chain Sequence |
YIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTEG
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 44-308 | 265 | 1-43 | 346-411 | 309-345 | 43 | 66 | slipknot | ||
| view details |
|
2.1 | 14-358 | 345 | 1-13 | 368-411 | 359-367 | 13 | 44 | slipknot | ||
| view details |
 |
1.1 | 60-316 | 257 | 1-47, 326-411 | 48-59, 317-325 | 47 | 86 | slipknot | |||
| view details |
|
2.1 | 55-325 | 271 | 1-47, 331-411 | 48-54, 326-330 | 47 | 81 | slipknot | |||
| view details |
|
1.1 | 62-330 | 269 | 1-47, 343-411 | 48-61, 331-342 | 47 | 69 | slipknot | |||
| view details |
|
1.1 | 60-326 | 267 | 1-54, 331-411 | 55-59, 327-330 | 54 | 81 | slipknot | |||
| view details |
|
2.1 | 59-325 | 267 | 1-54, 327-411 | 55-58, 326-326 | 54 | 85 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| total genus |
 Genus: 149
|
| ec nomenclature | |
| pdb deposition date | 2014-03-08 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
