| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-318 | 273 | 1-45 | 336-408 | 319-335 | 45 | 73 | slipknot |
Chain Sequence |
EYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 44-307 | 264 | 1-43 | 343-408 | 308-342 | 43 | 66 | slipknot | ||
| view details |
|
2.1 | 22-356 | 335 | 1-21 | 366-408 | 357-365 | 21 | 43 | slipknot | ||
| view details |
|
2.1 | 36-304 | 269 | 1-29, 308-408 | 30-35, 305-307 | 29 | 101 | slipknot | |||
| view details |
 |
1.1 | 55-313 | 259 | 1-43, 324-408 | 44-54, 314-323 | 43 | 85 | slipknot | |||
| view details |
|
1.1 | 57-313 | 257 | 1-54, 324-408 | 55-56, 314-323 | 54 | 85 | slipknot | |||
| view details |
|
1.1 | 57-329 | 273 | 1-48, 338-408 | 49-56, 330-337 | 48 | 71 | slipknot | |||
| view details |
|
1.1 | 57-358 | 302 | 1-52, 363-408 | 53-56, 359-362 | 52 | 46 | slipknot |
| sequence length |
408
|
| structure length |
408
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-03-08 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
