| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-321 | 276 | 1-45 | 339-411 | 322-338 | 45 | 73 | slipknot |
Chain Sequence |
KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 46-308 | 263 | 1-45 | 346-411 | 309-345 | 45 | 66 | slipknot | ||
| view details |
|
2.1 | 21-358 | 338 | 1-20 | 369-411 | 359-368 | 20 | 43 | slipknot | ||
| view details |
|
2.1 | 40-358 | 319 | 1-23, 367-411 | 24-39, 359-366 | 23 | 45 | slipknot | |||
| view details |
|
2.1 | 62-324 | 263 | 1-47, 331-411 | 48-61, 325-330 | 47 | 81 | slipknot | |||
| view details |
|
2.1 | 62-330 | 269 | 1-47, 333-411 | 48-61, 331-332 | 47 | 79 | slipknot | |||
| view details |
 |
1.1 | 62-332 | 271 | 1-50, 339-411 | 51-61, 333-338 | 50 | 73 | slipknot | |||
| view details |
|
1.1 | 62-338 | 277 | 1-50, 342-411 | 51-61, 339-341 | 50 | 70 | slipknot | |||
| view details |
|
1.1 | 60-313 | 254 | 1-51, 325-411 | 52-59, 314-324 | 51 | 87 | slipknot | |||
| view details |
|
1.1 | 62-317 | 256 | 1-59, 325-411 | 60-61, 318-324 | 59 | 87 | slipknot |
| sequence length |
411
|
| structure length |
411
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-03-08 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| C | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
