| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 47-320 | 274 | 1-46 | 338-410 | 321-337 | 46 | 73 | slipknot |
Chain Sequence |
YIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 46-311 | 266 | 1-45 | 345-410 | 312-344 | 45 | 66 | slipknot | ||
| view details |
|
2.1 | 38-356 | 319 | 1-15, 367-410 | 16-37, 357-366 | 15 | 44 | slipknot | |||
| view details |
 |
1.1 | 49-333 | 285 | 1-45, 340-410 | 46-48, 334-339 | 45 | 71 | slipknot | |||
| view details |
|
1.1 | 57-329 | 273 | 1-47, 341-410 | 48-56, 330-340 | 47 | 70 | slipknot | |||
| view details |
|
2.1 | 59-316 | 258 | 1-51, 327-410 | 52-58, 317-326 | 51 | 84 | slipknot | |||
| view details |
|
1.1 | 58-360 | 303 | 1-52, 365-410 | 53-57, 361-364 | 52 | 46 | slipknot |
| sequence length |
410
|
| structure length |
410
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| total genus |
 Genus: 138
|
| ec nomenclature | |
| pdb deposition date | 2014-03-24 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
