| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 47-320 | 274 | 1-46 | 337-410 | 321-336 | 46 | 74 | slipknot |
Chain Sequence |
YIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 46-310 | 265 | 1-45 | 345-410 | 311-344 | 45 | 66 | slipknot | ||
| view details |
|
2.1 | 30-358 | 329 | 1-3, 368-410 | 4-29, 359-367 | 3 | 43 | slipknot | |||
| view details |
 |
1.1 | 52-323 | 272 | 1-46, 331-410 | 47-51, 324-330 | 46 | 80 | slipknot | |||
| view details |
|
1.1 | 58-314 | 257 | 1-48, 327-410 | 49-57, 315-326 | 48 | 84 | slipknot | |||
| view details |
|
1.1 | 58-326 | 269 | 1-51, 328-410 | 52-57, 327-327 | 51 | 83 | slipknot | |||
| view details |
|
1.1 | 61-328 | 268 | 1-48, 342-410 | 49-60, 329-341 | 48 | 69 | slipknot | |||
| view details |
|
1.1 | 59-361 | 303 | 1-49, 368-410 | 50-58, 362-367 | 49 | 43 | slipknot |
| sequence length |
410
|
| structure length |
410
|
| publication title |
Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
GltPh
|
| source organism |
Pyrococcus horikoshii
|
| ec nomenclature | |
| pdb deposition date | 2014-03-24 |
| KnotProt deposition date | 2014-08-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| B | PF00375 | SDF | Sodium:dicarboxylate symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
