| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 219-271 | 53 | 1-218, 272-306 | 218 | 35 | knot |
Chain Sequence |
RGRPYTLSVALPGSILDNAQSPELRTYLAGQIARACAIFCVDEIVVFDEE-----------------GQACVQLARILQYLECPQYLRKAFFPKHLQFAGLLNPLDSPHHMR--QDEESEFREGIVVDRPTRPGHGSFVNCGMKKEVKIDKNLEPGLRVTVRLNQQQDCKTYHGKVVSSQDPRTKA--GLYWGYTVRLASCLSAVFAEAPFQDGYDLTIGTSERGSDVASAQLPNFRHALVVFGGLQGLEAGADADPNLEVAEPSVLFDLYVNTCPGQGSRTIRTEEAILISLAALQPGLTQAGAR
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 196-251 | 56 | 1-195, 252-285 | 195 | 34 | knot | ||||
| view details |
|
3.1 | 197-252 | 56 | 1-195, 271-285 | 196-196, 253-270 | 195 | 15 | slipknot | |||
| view details |
|
3.1 | 197-271 | 75 | 1-195, 279-285 | 196-196, 272-278 | 195 | 7 | slipknot |
| sequence length |
306
|
| structure length |
285
|
| publication title |
The Crystal Structure of Human C9orf114 in complex with S-adenosyl-homocysteine
rcsb |
| molecule tags |
Transferase
|
| molecule keywords |
C9orf114
|
| source organism |
Homo sapiens
|
| missing residues |
51-67, 96-97, 168-169
|
| total genus |
 Genus: 89
|
| ec nomenclature | |
| pdb deposition date | 2014-09-29 |
| KnotProt deposition date | 2015-02-07 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02598 | Methyltrn_RNA_3 | Putative RNA methyltransferase |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
