| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 29-228 | 200 | 229-433 | 1-12 | 13-28 | 12 | 204 | slipknot | ||
| view details |
 |
41 | 7-261 | 255 | 1-6 | 304-433 | 262-303 | 6 | 130 | slipknot |
Chain Sequence |
GFILAAMGSAVGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGKPWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPDIFDSIRLGPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGVLGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGWKTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAFQ
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.2 | 10-285 | 276 | 1-9 | 290-433 | 286-289 | 9 | 144 | slipknot | ||
| view details |
|
3.2 | 7-295 | 289 | 1-6 | 305-433 | 296-304 | 6 | 129 | slipknot | ||
| view details |
|
3.2 | 11-257 | 247 | 1-4, 263-433 | 5-10, 258-262 | 4 | 171 | slipknot | |||
| view details |
 |
1.1 | 13-247 | 235 | 1-8, 253-433 | 9-12, 248-252 | 8 | 181 | slipknot | |||
| view details |
 |
2.1 | 34-311 | 278 | 1-8, 373-433 | 9-33, 312-372 | 8 | 61 | slipknot | |||
| view details |
|
2.1 | 17-401 | 385 | 1-9, 412-433 | 10-16, 402-411 | 9 | 22 | slipknot | |||
| view details |
|
2.1 | 26-219 | 194 | 1-10, 232-433 | 11-25, 220-231 | 10 | 202 | slipknot | |||
| view details |
|
2.1 | 33-372 | 340 | 373-433 | 1-10 | 11-32 | 10 | 60 | slipknot | ||
| view details |
|
1.1 | 21-243 | 223 | 1-13, 252-433 | 14-20, 244-251 | 13 | 182 | slipknot | |||
| view details |
|
2.1 | 21-232 | 212 | 1-16, 241-433 | 17-20, 233-240 | 16 | 193 | slipknot | |||
| view details |
|
1.1 | 25-240 | 216 | 1-18, 259-433 | 19-24, 241-258 | 18 | 175 | slipknot | |||
| view details |
|
1.1 | 35-239 | 205 | 1-21, 261-433 | 22-34, 240-260 | 21 | 173 | slipknot | |||
| view details |
|
2.1 | 31-223 | 193 | 1-25, 228-433 | 26-30, 224-227 | 25 | 206 | slipknot | |||
| view details |
|
2.1 | 35-227 | 193 | 1-26, 240-433 | 27-34, 228-239 | 26 | 194 | slipknot |
| sequence length |
433
|
| structure length |
433
|
| publication title |
A Mechanism for Intracellular Release of Na by Neurotransmitter:Sodium Symporters
rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
TRANSPORTER
|
| source organism |
Bacillus halodurans
|
| total genus |
 Genus: 169
|
| ec nomenclature | |
| pdb deposition date | 2014-07-02 |
| KnotProt deposition date | 2014-09-28 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00209 | SNF | Sodium:neurotransmitter symporter family |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
