4V1Aa

Structure of the large subunit of the mammalian mitoribosome, part 2 of 2
Knot K -31 -31 -31 -31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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-31 193-260 68 1-192, 261-393 192 133 knot
Chain Sequence
AYEWGVRSTRKPEPPPLDRVYEIPGLEPITYAGKMHFMPGLARPVFPPWDPGWTHPKFRRLPPLHEHPLYKDQACYVFHQRCRLLEGVKQALWLTKTQLIEGLPEKVLRLADDPRNHIENQDERVLNAISHARLWHSTEDIPKRETYCPVIVDSLIQLCKSQILKHPSLARRICAQNNTLSATWNRESILLQVHGSSGARLNAKDPLPPVASQEEVEATKNHVLETFYPISPTMGLQECNVYDVNDDTGFQEGYPYPCPHTLYFLESANLRPRRFQPDQLRAKMILFAFGSALAQARLLYGNDSKVLEQPVVVQSVGTDGRLFQFLVLQLNTTDLASDEGVKNLAWVDSDQLLYQHFWCLPVIKKKVVVEPVGPIGFQPETFRKFLALYLHGA
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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2.1m 77-381 305 1-76, 382-393 76 12 knot
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2.1m 188-263 76 1-179, 282-393 180-187, 264-281 179 112 slipknot
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2.1m 194-347 154 348-393 1-179 180-193 179 45 slipknot
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2.1m 195-310 116 1-183, 319-393 184-194, 311-318 183 75 slipknot
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3.1m 195-318 124 1-183, 326-393 184-194, 319-325 183 68 slipknot
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2.1m 193-281 89 1-185, 293-393 186-192, 282-292 185 101 slipknot
publication title The Complete Structure of the Large Subunit of the Mammalian Mitochondrial Ribosome
doi rcsb
structure length 393
molecule tags Ribosome
sequence length 393
total genus Genus: 81
molecule keywords MITORIBOSOMAL PROTEIN ML37, MRPL37
ec nomenclature
pdb deposition date 2014-09-25
KnotProt deposition date 2014-10-13
Image from the rcsb pdb (www.rcsb.org)
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