| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 25-188 | 164 | 189-395 | 1-5 | 6-24 | 5 | 206 | slipknot |
Chain Sequence |
VGYMDPGNWITSMQGGAQYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALITVFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTDILNGFVPHKEIVTNQGILYIALGIIGATIMPHNLYLHSSIVQSRKYDRHDNEEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFFGTKTNDLGGFYDLYHALKTEPVLGATLGGVMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRSLAVIPVIICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNIISWTLIVILSGLNVY
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 27-350 | 324 | 1-26, 351-395 | 26 | 45 | knot | ||||
| view details |
|
2.1 | 17-183 | 167 | 1-16 | 216-395 | 184-215 | 16 | 180 | slipknot | ||
| view details |
 |
1.1 | 18-219 | 202 | 1-17 | 234-395 | 220-233 | 17 | 162 | slipknot | ||
| view details |
 |
3.2 | 10-255 | 246 | 1-9 | 274-395 | 256-273 | 9 | 122 | slipknot | ||
| view details |
|
2.1 | 28-293 | 266 | 1-27 | 339-395 | 294-338 | 27 | 57 | slipknot | ||
| view details |
|
1.1 | 12-178 | 167 | 1-2, 184-395 | 3-11, 179-183 | 2 | 212 | slipknot | |||
| view details |
|
1.1 | 19-178 | 160 | 1-11, 188-395 | 12-18, 179-187 | 11 | 208 | slipknot | |||
| view details |
|
1.1 | 21-178 | 158 | 1-18, 188-395 | 19-20, 179-187 | 18 | 208 | slipknot | |||
| view details |
|
2.1 | 23-195 | 173 | 1-18, 215-395 | 19-22, 196-214 | 18 | 181 | slipknot | |||
| view details |
|
2.1 | 25-280 | 256 | 1-17, 286-395 | 18-24, 281-285 | 17 | 110 | slipknot | |||
| view details |
|
2.1 | 26-204 | 179 | 1-18, 219-395 | 19-25, 205-218 | 18 | 177 | slipknot | |||
| view details |
|
2.1 | 29-191 | 163 | 1-19, 217-395 | 20-28, 192-216 | 19 | 179 | slipknot | |||
| view details |
|
1.1 | 29-220 | 192 | 1-19, 234-395 | 20-28, 221-233 | 19 | 162 | slipknot | |||
| view details |
|
2.1 | 28-216 | 189 | 1-25, 219-395 | 26-27, 217-218 | 25 | 177 | slipknot |
| sequence length |
395
|
| structure length |
395
|
| publication title |
Crystal structure of a SLC11 (NRAMP) transporter reveals the basis for transition-metal ion transport.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Divalent metal cation transporter MntH
|
| source organism |
Staphylococcus capitis vcu116
|
| total genus |
 Genus: 142
|
| ec nomenclature | |
| pdb deposition date | 2014-09-19 |
| KnotProt deposition date | 2015-02-09 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01566 | Nramp | Natural resistance-associated macrophage protein |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
