| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 23-188 | 166 | 189-395 | 1-5 | 6-22 | 5 | 206 | slipknot |
Chain Sequence |
VGYMDPGNWITSMQGGAQYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALITVFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTDILNGFVPHKEIVTNQGILYIALGIIGATIMPHNLYLHSSIVQSRKYDRHDNEEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFFGTKTNDLGGFYDLYHALKTEPVLGATLGGVMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRSLAVIPVIICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNIISWTLIVILSGLNVY
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
2.1 | 21-347 | 327 | 1-20, 348-395 | 20 | 48 | knot | ||||
| view details |
 |
1.1 | 19-179 | 161 | 1-18 | 190-395 | 180-189 | 18 | 206 | slipknot | ||
| view details |
|
2.1 | 18-191 | 174 | 1-17 | 218-395 | 192-217 | 17 | 178 | slipknot | ||
| view details |
 |
2.3 | 11-229 | 219 | 1-10 | 237-395 | 230-236 | 10 | 159 | slipknot | ||
| view details |
 |
3.2 | 9-249 | 241 | 1-8 | 273-395 | 250-272 | 8 | 123 | slipknot | ||
| view details |
|
3.2 | 6-272 | 267 | 1-5 | 280-395 | 273-279 | 5 | 116 | slipknot | ||
| view details |
|
2.1 | 17-217 | 201 | 1-6, 229-395 | 7-16, 218-228 | 6 | 167 | slipknot | |||
| view details |
|
1.1 | 17-228 | 212 | 1-6, 232-395 | 7-16, 229-231 | 6 | 164 | slipknot | |||
| view details |
|
1.1 | 19-215 | 197 | 1-16, 229-395 | 17-18, 216-228 | 16 | 167 | slipknot | |||
| view details |
 |
3.1 | 22-194 | 173 | 1-17, 213-395 | 18-21, 195-212 | 17 | 183 | slipknot | |||
| view details |
|
3.1 | 22-212 | 191 | 1-17, 216-395 | 18-21, 213-215 | 17 | 180 | slipknot | |||
| view details |
|
2.1 | 28-192 | 165 | 1-18, 214-395 | 19-27, 193-213 | 18 | 182 | slipknot | |||
| view details |
|
2.1 | 29-197 | 169 | 1-27, 212-395 | 28-28, 198-211 | 27 | 184 | slipknot | |||
| view details |
|
1.1 | 30-223 | 194 | 1-19, 235-395 | 20-29, 224-234 | 19 | 161 | slipknot |
| sequence length |
395
|
| structure length |
395
|
| publication title |
Crystal structure of a SLC11 (NRAMP) transporter reveals the basis for transition-metal ion transport.
pubmed doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
Divalent metal cation transporter MntH
|
| source organism |
Staphylococcus capitis
|
| total genus |
 Genus: 142
|
| ec nomenclature | |
| pdb deposition date | 2014-09-19 |
| KnotProt deposition date | 2015-02-09 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01566 | Nramp | Natural resistance-associated macrophage protein |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
