4WSGA

Crystal structure of soluble wr piv5 f-gcnt
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 30-239 210 1-29 248-479 240-247 29 232 slipknot
Chain Sequence
LDLAALMQIGVIPTNVRQLMYYTEASSAFIVVKLMPTIDSPISGCNITSISSYNATVTKLLQPIGENLETIRNQLIPTRRRFAGVVIGLAALGVATAAQVTAAVALVKANENAAAILNLKNAIQKTNAAVADVVQATQSLGTAVQAVQDHINSVVSPAITAANCKAQDAIIGSILNLYLTELTTIFHNQITNPALSPITIQALRILLGSTLPTVVEKSFNTQISAAELLSSGLLTGQIVGLDLTYMQMVIKIELPTLTVQPATQIIDLATISAFINNQEVMAQLPTRVMVTGSLIQAYPASQCTITPNTVYCRYNDAQVLSDDTMACLQGNLTRCTFSPVVGSFLTRFVLFDGIVYANCRSMLCKCMQPAAVILQPSSSPVTVIDMYKCVSLQLDNLRFTITQLANVTYNSTIKLESSQILPIDPLDISQNLAAVNKSLSDALQHLAQSDTYLSAIEDKIEEILSKIYHIENEIARIKK
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
2.1 31-237 207 1-30 250-479 238-249 30 230 slipknot
view details
1.1 36-240 205 1-31, 247-479 32-35, 241-246 31 233 slipknot
publication title Crystal Structure of Soluble WR PIV5 F-GCNt
rcsb
structure length 479
molecule tags Viral protein
source organism Parainfluenza virus 5
sequence length 479
total genus Genus: 121
molecule keywords Fusion glycoprotein F0
ec nomenclature
pdb deposition date 2014-10-27
KnotProt deposition date 2015-02-12
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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