| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 46-311 | 266 | 1-45 | 333-405 | 312-332 | 45 | 73 | slipknot |
Chain Sequence |
VLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTSSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDRGRTMVNVTGDLTGTAIVAKTE
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 44-305 | 262 | 1-43 | 340-405 | 306-339 | 43 | 66 | slipknot | ||
| view details |
 |
2.1 | 38-351 | 314 | 1-37 | 363-405 | 352-362 | 37 | 43 | slipknot | ||
| view details |
|
2.1 | 42-354 | 313 | 1-38, 360-405 | 39-41, 355-359 | 38 | 46 | slipknot | |||
| view details |
 |
1.1 | 54-311 | 258 | 1-45, 322-405 | 46-53, 312-321 | 45 | 84 | slipknot | |||
| view details |
|
1.1 | 51-333 | 283 | 1-45, 337-405 | 46-50, 334-336 | 45 | 69 | slipknot | |||
| view details |
|
1.1 | 56-325 | 270 | 1-47, 333-405 | 48-55, 326-332 | 47 | 73 | slipknot | |||
| view details |
|
2.1 | 56-321 | 266 | 1-52, 326-405 | 53-55, 322-325 | 52 | 80 | slipknot |
| sequence length |
405
|
| structure length |
405
|
| publication title |
Transport domain motions in a glutamate transporter homologue determine turnover rate
doi rcsb |
| molecule tags |
Transport protein
|
| molecule keywords |
425aa long hypothetical proton glutamate symport protein
|
| source organism |
Pyrococcus horikoshii
|
| total genus |
 Genus: 118
|
| ec nomenclature | |
| pdb deposition date | 2014-11-26 |
| KnotProt deposition date | 2015-02-05 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
