4X3LA

Crystal structure of ttha0275 from thermus thermophilus (hb8) in complex with 5'-methylthioadenosine in space group p21212
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 185-225 41 1-184, 226-260 184 35 knot
Chain Sequence
MRIESPQNPRVKALAALKERKERERTGRFLVEGRREVERALEAGLSLETLLLGPKARPEDRALAGGAEVLELSERALARVSTRENPAQVLGVFRLPRRSLAGVTLGAAPLVLVLLGLEKPGNLGAILRAADGAGADLVLVAEGVDLFSPQVIRNSTGAVFALPVYPVAEGEAARFLEEHNLPLVAATPEGERLYWEGDYRGGVAFLLGAEDKGLPEAWKRRAQVRVRIPMRGRADSLNVAVTAALLLYEALRQRSGGAPL
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 186-226 41 1-185, 227-260 185 34 knot
sequence length 260
structure length 260
publication title Crystal Structure of TTHA0275 from Thermus thermophilus (HB8)
rcsb
molecule tags Transferase
molecule keywords RNA 2'-O ribose methyltransferase
source organism Thermus thermophilus
total genus Genus: 80
ec nomenclature
pdb deposition date 2014-12-01
KnotProt deposition date 2016-01-22
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the pdb database (?% sequence similarity)

 
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