| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
41 | 31-270 | 240 | 1-30, 271-317 | 30 | 47 | knot |
Chain Sequence |
RSMVAGHASG--------------EEIHLAGSIQPHGALLVVSEHDHRVIQASANAAEFLNLGSVLGVPLAEIDGDLLIKILPHLDPTAEGMPVAVRCRIGNPSTEYCGLMHRPPEGGLIIELERAGPSIDLSGTLAPALERIRTAGSLRALCDDTVLLFQQCTGYDRVMVYRFDEQGHGLVFSECHVPGLESYFGNRYPSSTVPQMARQLYVRQRVRVLVDVTYQPVPLEPRLSPLTGRDLDMSGCFLRSMSPCHLQYLKDMGVRATLAVSLVVGGKLWGLVVCHHYLPRFIRFELRAICKRLAERIATRITALES
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
4.1 | 30-311 | 282 | 1-29, 312-317 | 29 | 6 | knot | ||||
| view details |
 |
3.2m | 31-267 | 237 | 1-30 | 276-317 | 268-275 | 30 | 42 | slipknot | ||
| view details |
|
4.1 | 26-275 | 250 | 1-25 | 280-317 | 276-279 | 25 | 38 | slipknot | ||
| view details |
|
4.1 | 26-279 | 254 | 1-25 | 281-317 | 280-280 | 25 | 37 | slipknot | ||
| view details |
|
4.1 | 31-277 | 247 | 1-30 | 288-317 | 278-287 | 30 | 30 | slipknot | ||
| view details |
|
3.2m | 31-290 | 260 | 1-30 | 312-317 | 291-311 | 30 | 6 | slipknot |
| sequence length |
317
|
| structure length |
303
|
| publication title |
Molecular Basis of Spectral Diversity in Near-Infrared Phytochrome-Based Fluorescent Proteins.
pubmed doi rcsb |
| molecule tags |
Fluorescent protein
|
| molecule keywords |
BphP1-FP/C20S
|
| source organism |
Rhodopseudomonas palustris
|
| missing residues |
11-24
|
| total genus |
 Genus: 92
|
| ec nomenclature | |
| pdb deposition date | 2015-01-23 |
| KnotProt deposition date | 2018-09-12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
