Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
view details | +31 | 89-133 | 45 | 1-88, 134-249 | 88 | 116 | knot |
Chain Sequence |
GSHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG--ASASF---ADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
view details | 3.1 | 89-134 | 46 | 1-88, 135-244 | 88 | 110 | knot | |||||
view details | 2.1 | 86-131 | 46 | 1-85 | 137-244 | 132-136 | 85 | 108 | slipknot | |||
view details |
|
3.1 | 91-215 | 125 | 1-88, 237-244 | 89-90, 216-236 | 88 | 8 | slipknot | |||
view details |
|
2.1 | 91-236 | 146 | 237-244 | 1-88 | 89-90 | 88 | 7 | slipknot |
sequence length |
249
|
structure length |
244
|
publication title |
Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
rcsb |
molecule tags |
Transferase/transferase inhibitor
|
molecule keywords |
tRNA (guanine-N(1)-)-methyltransferase
|
source organism |
Haemophilus influenzae (strain atcc 51907 / dsm 11121 / kw20 / rd)
|
missing residues |
165-166, 170-172
|
total genus |
Genus: 70
|
ec nomenclature | |
pdb deposition date | 2015-03-13 |
KnotProt deposition date | 2015-11-11 |
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...