5AJ9A

G7 mutant of pas, arylsulfatase from pseudomonas aeruginosa
Warning
  • Chain breaks within knot 31 (displayed as a gray area on the plot and as '-' on the sequence). The broken part of the chain has been replaced by a straight segment, which may affect what knot types are detected - be careful with interpreting results.
Slipknot S +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
+31 7-315 309 1-6 384-526 316-383 6 143 slipknot
Chain Sequence
KRPNFLVIVADDLGFSDIGAFGGEIATPNLDALAIAGLRLTDFHTASA-SPTRSMLLTGTDHHIAGLGTVAEALTPELEGKPGYEGHLNERVVALPELLREAGYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLDFLDRHYDNSLENIGSANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWGLFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHDLADSQPGKLAELIEHWKRYVSDTGVVE
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 8-318 311 1-7 354-525 319-353 7 172 slipknot
view details
3.1 4-369 366 1-3 377-525 370-376 3 149 slipknot
view details
2.1 5-380 376 1-4 384-525 381-383 4 142 slipknot
view details
2.1 9-327 319 1-7, 331-525 8-8, 328-330 7 195 slipknot
missing residues 49
publication title Arylsulfatase from Pseudomonas Aeruginosa
rcsb
structure length 525
molecule tags Hydrolase
source organism Pseudomonas aeruginosa
sequence length 526
total genus Genus: 179
molecule keywords ARYLSULFATASE
ec nomenclature
pdb deposition date 2015-02-20
KnotProt deposition date 2016-03-20
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the KnotProt database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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