| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 114-187 | 74 | 1-113 | 202-496 | 188-201 | 113 | 295 | slipknot |
Chain Sequence |
AAPVAFGFPALSTPGAGGLAVSISASELSAAIAGIIAKLKK------PFGVVLSSLIPSEIAKDDPNMMSKIVTSLPADDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSGVPMSVPVVDAKPTERPGVFTASIPGAPVLNISVNDSTPAVQTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHNAVYVSVSDVLSPDQVKQRQDEENRRQQEWDATHPVEAAERNCERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSAAQERRKQKENKEKDAKDKCAMESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFDDFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYELHHDKPISQGGEVYDMDNIRVTTPKRHIDIHR
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
|
 |
2.1 | 24-183 | 160 | 1-9, 196-490 | 10-23, 184-195 | 9 | 295 | slipknot | ||
| view details |
 |
3.1 | 68-181 | 114 | 1-48, 196-490 | 49-67, 182-195 | 48 | 295 | slipknot | |||
| view details |
 |
1.1 | 102-190 | 89 | 1-95, 198-490 | 96-101, 191-197 | 95 | 293 | slipknot | |||
| view details |
|
3.1 | 106-182 | 77 | 1-97, 194-490 | 98-105, 183-193 | 97 | 297 | slipknot | |||
| view details |
|
3.1 | 106-193 | 88 | 1-101, 195-490 | 102-105, 194-194 | 101 | 296 | slipknot | |||
| view details |
|
3.1 | 107-182 | 76 | 1-105, 194-490 | 106-106, 183-193 | 105 | 297 | slipknot |
| sequence length |
496
|
| structure length |
490
|
| publication title |
Structural and biophysical analysis of nuclease protein antibiotics.
pubmed doi rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
Colicin-E9
|
| source organism |
Escherichia coli
|
| missing residues |
42-47
|
| total genus |
 Genus: 156
|
| ec nomenclature | |
| pdb deposition date | 2015-11-20 |
| KnotProt deposition date | 2016-07-20 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
