5FAIA

Emg1 n1-specific pseudouridine methyltransferase
Knot K +31
Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
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+31 140-181 42 1-139, 182-209 139 28 knot
Chain Sequence
NKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI
Whole chain analysis
Subchain analysis 

Knotoid cutoff: 0.5


Knotoid matrix content: 1

Knot core range Knot core length Knot tails range Slipknot tails range Slipknot loops range N-end length C-end length Type
view details
3.1 140-183 44 1-139, 184-209 139 26 knot
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2.1 138-179 42 1-137 185-209 180-184 137 25 slipknot
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3.1 142-204 63 205-209 1-139 140-141 139 4 slipknot
publication title EMG1 N1-Specific Pseudouridine Methyltransferase
rcsb
structure length 209
molecule tags Transferase
source organism Homo sapiens
sequence length 209
total genus Genus: 57
molecule keywords Ribosomal RNA small subunit methyltransferase NEP1
ec nomenclature
pdb deposition date 2015-12-11
KnotProt deposition date 2016-01-21
Image from the rcsb pdb (www.rcsb.org)
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