| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
+31 | 8-273 | 266 | 1-7 | 299-467 | 274-298 | 7 | 169 | slipknot |
Chain Sequence |
RQQEKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHDMGSLRGFKHKEPVAKPFTDPEFPVNNDSFLDVGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDGMASHRMVTKHISFYDEMTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLAGIAVPAEKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRMVRGPRYKYTHYLEGNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYITRSKDDYRSLKVDADPRCRNHTPGYPSHEGPGAREI
|
Knotoid cutoff: 0.5
Knotoid matrix content: 1
| Knot core range | Knot core length | Knot tails range | Slipknot tails range | Slipknot loops range | N-end length | C-end length | Type | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| view details |
 |
3.1 | 6-274 | 269 | 1-5 | 279-467 | 275-278 | 5 | 189 | slipknot | ||
| view details |
 |
4.2m | 6-278 | 273 | 1-5 | 283-467 | 279-282 | 5 | 185 | slipknot | ||
| view details |
|
3.1 | 7-282 | 276 | 1-6 | 297-467 | 283-296 | 6 | 171 | slipknot |
| sequence length |
467
|
| structure length |
467
|
| publication title |
Metabolism of Host Gags by the Human Gut Bacterium Bacteroides Thetaiotaomicron
rcsb |
| molecule tags |
Hydrolase
|
| molecule keywords |
2-O GLYCOSAMINOGLYCAN SULFATASE
|
| source organism |
Bacteroides thetaiotaomicron
|
| total genus |
 Genus: 175
|
| ec nomenclature | |
| pdb deposition date | 2016-04-13 |
| KnotProt deposition date | 2018-09-12 |
Image from the rcsb pdb (www.rcsb.org)
#similar chains in the KnotProt database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
